I see what you mean, and the answer is that the Yuneec charger does the minimum needed to get you back in the air without regard to giving you the information needed to take care of your batteries.
Do all the chargers charge? Yes.
Do they all provide balance charging? Yes, though the Yuneec charger does not provide any readout of the individual cell voltage levels.
Can you check those individual levels with a voltmeter? Sure, but if the charger provides that information for you, one less thing to concern yourself with.
What the 3rd party chargers do that the OEM charger does not do, is give you individual readouts on the voltages of individual cells. Ideally you want those voltages to be the same, and THAT is what the balancing does. Individually charging cells to the same voltage... no cell gets overcharged nor undercharged. Seeing a significant difference in cell voltages is what can give indications of oncoming failure.
Same goes for internal resistance... you want not only relatively low readings, but any measurements that one or more cells have a significant difference in IR is an indicator that the battery is on it's way out. Heat is the enemy of all batteries... IR creates heat, which accelerates the chemical processes that produce internal gases and swelling. Once a battery shows signs of swelling, it needs to be disposed of, or the fire risk becomes too high. As you can see, the parameters of monitoring your batteries has ramifications far beyond just having the additional expense of unnecessary battery replacement.